Ali, S., Ullah, M. I., Sajjad, A., Shakeel, Q. & Hussain, A. Environmental and health effects of pesticide residues. In Sustainable Agriculture Reviews 48 Vol. 48 (eds Inamuddin, Ahamed, M. I. & Lichtfouse, E.) 311–336 (Springer International…
Category: 5. Biology
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scGPT: end-to-end protocol for fine-tuned retinal cell type annotation
Cui, H. et al. scGPT: toward building a foundation model for single-cell multi-omics using generative AI. Nat. Methods 21, 1470–1480 (2024).
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Theodoris, C. V. et al….
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Developing angiogenesis-related prognostic biomarkers and therapeutic strategies in bladder cancer using deep learning and machine learning
Establishment of ARGS model and regulation mechanism of BLCA angiogenesis
Differentially expressed analysis identified 147 angiogenesis-related genes (98 downregulated, 49 upregulated). A heatmap subsequently visualized ARGS expression patterns…
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Molecular and genomic insights into multidrug-resistant (MDR) and extensively drug-resistant (XDR) Pseudomonas aeruginosa causing burn wound infections in Bangladesh
Sample collection and isolate identification
Out of the initial 110 samples, 91 were selected for detailed analysis following preliminary assessment. From these 91 samples, 91 bacterial strains (n = 91) were successfully isolated which were…
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Upregulation of long non-coding RNA SNHG11 promotes apoptosis and its molecular mechanisms in human osteosarcoma U2OS cells
Cloning and plasmid construction
lncRNA SNHG11 pcDNA3.1-3xFlag-C plasmids and negative control plasmids were purchased from Youbio Biotech (Changsha, China). Transcript information: NR_003239.1.
Cell culture and transfections
U2OS cells (CL-0236,…
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New benzimidazole-triazole glycoconjugates as anti-cancer agents and EGFR inhibitors
Chemistry
All apparatuses data used to elucidate the chemical structure of new compounds is attached in the supplementary file, The azido sugars were prepared as earlier reported57,58. Representative NMR charts are attached in the Supplementary…
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Recruitment, rewiring and deep conservation in flowering plant gene regulation
Weirauch, M. T. et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell 158, 1431–1443 (2014).
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Baumgart,…
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Disinfection of medical devices with a steam machine that operates at atmospheric pressure and is suitable for home usage
Rowan, N. J., Kremer, T. & McDonnell, G. A review of spaulding’s classification system for effective cleaning, disinfection and sterilization of reusable medical devices: viewed through a modern-day lens that will inform and enable future…
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Correction: Integrating rare genetic variants into DPYD pharmacogenetic testing may help preventing fluoropyrimidine-induced toxicity
Correction: Integrating rare genetic variants into DPYD pharmacogenetic testing may help preventing fluoropyrimidine-induced toxicity
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A conserved coupling of transcriptional ON and OFF periods underlies bursting dynamics
Lelli, K. M., Slattery, M. & Mann, R. S. Disentangling the many layers of eukaryotic transcriptional regulation. Annu. Rev. Genet. 46, 43–68 (2012).
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