Category: 5. Biology

Single-cell multiome dataset

Single-cell multiome (snRNA-seq + snATAC-seq) data of the human left ventricle and lung were processed and clustered on the basis of RNA modality using Scanpy¹³⁷. The cells with high-quality RNA information (total…

Ethics statement

This study was conducted in full accordance with the Declaration of Helsinki. The study protocol was approved by the Ethics Committee of Graduate School of Dentistry, The University of Osaka (approval no. R1-E51) and the Ethics…

Mining the Snaptron database for alternative splicing events of interest

The Snaptron database⁴⁸ includes compiled exon-exon splice junction information across samples from four human RNA-Seq sample databases: SRA⁵², GTEx⁵³, TCGA⁵⁴, and ENCODE⁵⁶….

Genomic context and mobile element characterization

Based on our previous study demonstrating the influence of IS6770 on kup gene expression in JH2-2 strain, we conducted a comparative analysis of the genomic region between the kimA and kup gene…

We evaluated the mitogenome variation of 776 (733 modern and 43 ancient) North African subjects from Morocco, Algeria, Tunisia, Libya, and Egypt. The dataset, which includes 238 newly sequenced modern mitogenomes of North African origin together…